snR50

ALTERNATE NAMES: Z14

LENGTH: 89 nts

PROCESS: 2'-O-methylation of rRNA

TARGET SITE(S):
25S rRNA: Gm867

Guide Domains
 
Details of the guide at the Lowe Lab S. cerevisiae Methylation Guide snoRNA Database.
  Click number to see the target site in the 2D structure: 25S-867
Click number to see the approximate location of the modification site in the ribosome:25S-867

GENOMIC ORGANIZATION: Independent gene
 

SGD ORF MAP
ORFmap

GENE DISRUPTION PHENOTYPE: Viable

CORRESPONDENCES IN HUMANS AND PLANTS:
None reported

PHYLOGENETIC CONSERVATION IN FUNGI:
Click here to examine conservation of the snoRNA in fungal genomes using BLAST.

RNA SEQUENCE:

   1 uagaaugaug aaagagguag caauuugcag cagauuuuuc gugauugaau caaacaaaga
  61 uuaaccuuua cagaaccgcu acacugaua
 

YEAST GENOME DATABASE ENTRY:
Click here to view the SGD entry for this snoRNA.

REFERENCES:
Ni, J., and M. J. Fournier. (unpublished). In regards to discovery of snoRNA.
Zhou, H., and L. H. Qu. (unpublished). In regards to discovery of snoRNA.
Lowe, T. M., and S. R. Eddy. 1999. A computational screen for methylation guide snoRNAs in yeast. Science 283:1168-1171.


Last update: October 13, 2006 7:09 AM.