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T. thermophilus 23S rRNA (AY379548)
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1 GGUCAAGAUG GUAAGGGCCC ACGGUGGAUG CCUCGGCACC CGAGCCGAUG
51 AAGGACGUGG CUACCUGCGA UAAGCCAGGG GGAGCCGGUA GCGGGCGUGG
101 AUCCCUGGAU GUCCGAAUGG GGGAACCCGG CCGGCGGGAA CGCCGGUCAC
151 CGCGCUUUUG CGCGGGGGGA ACCUGGGGAA CUGAAACAUC UCAGUACCCA
201 GAGGAGAGGA AAGAGAAAUC GACUCCCUGA GUAGCGGCGA GCGAAAGGGG
251 ACCAGCCUAA ACCGUCCGGC UUGUCCGGGC GGGGUCGUGG GGCCCUCGGA
301 CACCGAAUCC CCAGCCUAGC CGAAGCUGUU GGGAAGCAGC GCCAGAGAGG
351 GUGAAAGCCC CGUAGGCGAA AGGUGGGGGG AUAGGUGAGG GUACCCGAGU
401 ACCCCGUGGU UCGUGGAGCC AUGGGGGAAU CUGGGCGGAC CACCGCCUAA
451 GGCUAAGUAC UCCGGGUGAC CGAUAGCGCA CCAGUACCGU GAGGGAAAGG
501 UGAAAAGAAC CCCGGGAGGG GAGUGAAAUA GAGCCUGAAA CCGUGGGCUU
551 ACAAGCAGUC ACGGCCCCGC AAGGGGUUGU GGCGUGCCUA UUGAAGCAUG
601 AGCCGGCGAC UCACGGUCGU GGGCGAGCUU AAGCCGUUGA GGCGGAGGCG
651 UAGGGAAACC GAGUCCGAAC AGGGCGCAAG CGGGCCGCAC GCGGCCCGCA
701 AAGUCCGCGG CCGUGGACCC GAAACCGGGC GAGCUAGCCC UGGCCAGGGU
751 GAAGCUGGGG UGAGACCCAG UGGAGGCCCG AACCGGUGGG GGAUGCAAAC
801 CCCUCGGAUG AGCUGGGGCU AGGAGUGAAA AGCUAACCGA GCCCGGAGAU
851 AGCUGGUUCU CCCCGAAAUG ACUUUAGGGU CAGCCUCAGG CGCUGACUGG
901 GGCCUGUAGA GCACUGAUAG GGCUAGGGGG CCCACCAGCC UACCAAACCC
951 UGUCAAACUC CGAAGGGUCC CAGGUGGAGC CUGGGAGUGA GGGCGCGAGC
1001 GAUAACGUCC GCGUCCGAGC GCGGGAACAA CCGAGACCGC CAGCUAAGGC
1051 CCCCAAGUCU GGGCUAAGUG GUAAAGGAUG UGGCGCCGCG AAGACAGCCA
1101 GGAGGUUGGC UUAGAAGCAG CCAUCCUUUA AAGAGUGCGU AAUAGCUCAC
1151 UGGUCGAGUG GCGCCGCGCC GAAAAUGAUC GGGGCUUAAG CCCAGCGCCG
1201 AAGCUGCGGG UCUGGGGGAU GACCCCAGGC GGUAGGGGAG CGUUCCCGAU
1251 GCCGAUGAAG GCCGACCCGC GAGGCGGCUG GAGGUAAGGG AAGUGCGAAU
1301 GCCGGCAUGA GUAACGAUAA AGAGGGUGAG AAUCCCUCUC GCCGUAAGCC
1351 CAAGGGUUCC UACGCAAUGG UCGUCAGCGU AGGGUUAGGC GGGACCUAAG
1401 GUGAAGCCGA AAGGCGUAGC CGAAGGGCAG CCGGUUAAUA UUCCGGCCCU
1451 UCCCGCAGGU GCGAUGGGGG GACGCUCUAG GCUAGGGGGA CCGGAGCCAU
1501 GGACGAGCCC GGCCAGAAGC GCAGGGUGGG AGGUAGGCAA AUCCGCCUCC
1551 CAACAAGCUC UGCGUGGUGG GGAAGCCCGU ACGGGUGACA ACCCCCCGAA
1601 GCCAGGGAGC CAAGAAAAGC CUCUAAGCAC AACCUGCGGG AACCCGUACC
1651 GCAAACCGAC ACAGGUGGGC GGGUGCAAGA GCACUCAGGC GCGCGGGAGA
1701 ACCCUCGCCA AGGAACUCUG CAAGUUGGCC CCGUAACUUC GGGAGAAGGG
1751 GUGCUCCCUG GGGUGAUGAG CCCCGGGGAG CCGCAGUGAA CAGGCUCUGG
1801 CGACUGUUUA CCAAAAACAC AGCUCUCUGC GAACUCGUAA GAGGAGGUAU
1851 AGGGAGCGAC GCUUGCCCGG UGCCGGAAGG UCAAGGGGAG GGGUGCAAGC
1901 CCCGAACCGA AGCCCCGGUG AACGGCGGCC GΨAACm?UAΨAA CmGGUCCUAAG
?
?
?
?
1951 GUAGCGAAAm?U UCCUUGUCGG GUAAGUUCCG ACm?CUGCACGA AAAGCGUAAC
?
m?C or Cm (?)
?
2001 GACCGGAGCG CUGUCUCGGC GAGGGACCCG GUGAAAUUGA ACUGGCCGUG
2051 AAGAUGCGGC CUACCCGUGG CAGGACGAAA AGACCCCGUG GAGCUUUACU
2101 GCAGCCUGGU GUUGGCUCUU GGUCGCGCCU GCGUAGGAUA GGUGGGAGCC
2151 UGUGAACCCC CGCCUCCGGG UGGGGGGGAG GCGCCGGUGA AAUACCACCC
2201 UGGCGCGGCU GGGGGCCUAA CCCUCGGAUG GGGGGACAGC GCUUGGCGGG
2251 CAGUUUGACU GGmGGCGGUCG CCUCCUAAAA GGUAACGGAG GCGCCCAAAG
?
2301 GUCCCCUCAG GCGGGACGGA AAUCCGCCGG AGAGCGCAAG GGUAGAAGGG
2351 GGCCUGACUG CGAGGCCUGC AAGCCGAGCA GGGGCGAAAG CCGGGCCUAG
2401 UGAACCGGUG GUCCCGUGUG GAAGGGCCAU CGAUCAACGG AUAAAAGUUA
2451 CCCCGGGGAU AACAGGCUGA UCUCCCCCGA GCGUCCACAG CGGCGGGGAG
2501 GUUUGGCACC UCGm?AUGUCGG CUCGUCGCAU CCUGGGGCUG AAGAAGGUCC
?
2551 CAAGGGUUGG GCUmGUUCGCC CAUUAAAGCG GCACGCGAGC UGGGUUCAGA
?
2601 ACGUCGUGAG ACAGUUCGGU CUCUAΨCCGC CACGGGCGCA GGAGGCUUGA
?
2651 GGGGGGCUCU UCCUAGUACG AGAGGACCGG AAGGGACGCA CCUCUGGUUU
2701 CCCAGCUGUC CCUCCAGGGG CAUAAGCUGG GUAGCCAUGU GCGGAAGGGA
2751 UAACCGCUGA AAGCAUCUAA GCGGGAAGCC CGCCCCAAGA UGAGGCCUCC
2801 CACGGCGUCA AGCCGGUAAG GACCCGGGAA GACCACCCGG UGGAUGGGCC
2851 GGGGGUGUAA GCGCCGCGAG GCGUUGAGCC GACCGGUCCC AAUCGUCCGA
2901 GGUCUUGACC CC
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