snR69

ALTERNATE NAMES: None reported

LENGTH: 101 nts

PROCESS: 2'-O-methylation of rRNA

TARGET SITE(S):
25S rRNA: Cm2948

Guide Domains
 
Details of the guide at the Lowe Lab S. cerevisiae Methylation Guide snoRNA Database.
  Click number to see the target site in the 2D structure: 25S-2948
Click number to see the approximate location of the modification site in the ribosome:25S-2948

GENOMIC ORGANIZATION: Independent gene
 

SGD ORF MAP
ORFmap

GENE DISRUPTION PHENOTYPE: Viable

CORRESPONDENCES IN HUMANS AND PLANTS:
None reported in human
Click here and see that yeast and Arabidopsis have corresponding modifications and guide snoRNAs.

PHYLOGENETIC CONSERVATION IN FUNGI:
Click here to examine conservation of the snoRNA in fungal genomes using BLAST.

RNA SEQUENCE:

   1 guuuaugaug agaccacguc cuuagugaca augcuauaaa cccagcucuu cgauucguuu
  61 uuaaugaaag ggagaagauu uuuuugucaa acgcucugag u

YEAST GENOME DATABASE ENTRY:
Click here to view the SGD entry for this snoRNA.

REFERENCES:
Lowe, T. M., and S. R. Eddy. 1999. A computational screen for methylation guide snoRNAs in yeast. Science 283:1168-1171.


Last update: October 13, 2006 7:35 AM.